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Genetic Findings: TUBa1a, transitions, and proteins, oh my!

30 Saturday Jan 2016

Posted by Mama Laughs in genetics, tuba1a

≈ 8 Comments

Tags

genetics, lissencephaly, tuba1a, twins

I received a phone call with regard to our genetic testing. If you’ve been following since “the beginning”, you may recall we have previously tested chromosome 17, and DCX gene, both of which are commonly found to be tied to Lissencephaly, but those results came back clean. We tapped the breaks on what could have been an expensive chase, and decided to focus on different things for a while.  I brought the topic back up after their 2nd birthday, so we ran whole exome sequencing through GenDx this time, with the support of our Chidren’s hospital.  And at no cost to us!

L was the “patient”, although J, N, and myself were tested as well. What was found was a NEW mutation. Neither J nor I were genetic carriers. It was not a chromosome disorder but in terms of location, was on 12q. More specifically it was the TUBA1A gene. TUBA1A is important in brain development. Mutations within it are not currently known to cause other body or organ issues, (not consistently linked to renal disease, deformations, etc) When this occurs, it is Autosomal Dominant. So in other words it is NOT present in big brother K in a recessive form.

Within TUBA1A, their specific mutation was on 652 – G to A: In the DNA sequence, there is a misspelling on a base pair. They have an A (adenine) where they should have a G (guanine). This type of mutation is referred to as a transition. It caused a change in the protein D218N. All of the above leads to a neuronal migration disorder as cells are aligning during pregnancy.

Their specific mutation had been as of yet unreported, but because nearby similar mutations have been reported on TUBA1A and known to cause Liss, they are confident this is the genetic issue.

According to the genetic counseor, TUBA1A mutations are found in only 1% of Classic Lissencephaly. (And Lissencephaly is already a rare 1 in 100,000)

They are not sure what causes this new mutation, but it is believed to be random with no known predisposition. That means the chances of recurrance are “very low”. They assign it less than 1%. I know of other families who were told something similar with other findings, yet had a reoccurance with a later child. When I asked if that means that possibly the combination of our DNA can be more likely to cause this mutation, she said no. But it is possible that even though the results are not in our blood, there could be mutations on a particular egg or sperm.  (I believe this is called being a mosaic carrier but I have more to learn about this part).  So while the existance of other mutations is unlikely, and the chances of getting pregnant with one of those if it does exist is very rare, they can never say 0% with confidence.

We were willing to hear if they discovered any other genetic predispositions (cancer, Huntington’s, heart disease, etc). There were no such secondary findings on L so therefore no further searching for those in the rest of us.

What does all this mean?  Beats me.  I wish I had paid more attention in biology back when they were talking about base pairs.  But I’m eager to see what I can round up to understand this better.  If you understand this sort of thing, feel free to chime in, or help me with intelligent questions.

What does all of this mean for L and N?  I can find families who are dealing with a much more specific, and seemingly similar set of circumstances.  Fellow moms have been a tremendous resource so far, and now I can hone in on a group who fits “us” even more and hopefully also offer similar support and ideas.

As far as their prognosis or severity changing…it doesn’t.  They’ve always been L and N, I’m just on a path to understanding them a bit better.  But they were precious and loved yesterday and they are precious and loved today.

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An Unexpected First

19 Wednesday Nov 2014

Posted by Mama Laughs in Uncategorized

≈ 2 Comments

Tags

CVI, lissencephaly, twins

Tuesday was a busy day at our Children’s hospital.  Up at 3:30 am, we got off to an early start getting organized and out the door.  Thanks to J for getting the boys changed and in their seats, and thanks to D for accompanying me on the trip for a very useful extra set of hands!

There were two planned appointments: Vision assessments for both boys, and a lingering upper GI appointment for Landon as a pre-surgery check.

Vision was first.  The boys have what is called Cortical Vision Impairment.  Essentially, it is a neurological (brain) rather than ocular (eye) based impairment.  We have a lot to learn about the boys’ CVI and Tuesday was a good start on that path.  They performed a few different tests to check response rates, and various other aspects of the communication from eye to brain.  I was allowed to help their eyes open for the first test, which involved a lot of strobe and blinking lights.  The second test involved simply colored, slow-moving shapes and pictures projected on to a wall in a dark room.  A video camera recorded their eye movements.  And they needed to actively participate.  Not surprisingly, Nolan surprised me.  He needed a few minutes, but eventually started clearly noticing and observing the wall.  I can’t say yet how the DR will assess his vision, or if there is much ability to work with, but I believe Nolan gave them the best test attempt we could have asked for.  Landon found the whole exercise silly, and chose not to participate.  🙂  But hopefully we can infer a thing or two from Nolan’s test.  And we’re already putting together some good therapy ideas.

The Upper GI went well, and they observed what they needed to for Landon’s pre-surgery checkout.  In the meantime, they were able to confirm the proper placement of Landon’s NJ tube as well.  Speaking of which, that bring us to the unplanned detour of the day.

Monday night, Landon’s tube quit working.  The pump would alarm, and did not fix even after replacing the bag and hookup.  We tried manually clearing his tube, but could not budge any liquids in or out.  Since it was already evening time, and he would have to fast for a few hours before his upper GI anyway, we decided to stop attempting feeds, and let the hospital determine what was wrong. Unlike the NG tubes, we can not move or replace Landon’s NJ tube without help from radiology.  I told D the plan Tuesday morning, and she agreed we were fine skipping the small amount of formula, and commented about what she used to do to fix that issue.  So in between Vision and the Upper GI appointment, we visited radiology for an NJ check.  Between waiting to get squeezed in, and a lengthy registration process, we ended up filling up what was supposed to be our relaxing two-hour lunch break.  During that time, the nurse joked about the same home remedy D mentioned.  So after a two-hour wait, that nurse checked in their “supplies” and found one remaining can of the secret ingredient that works great at unplugging tubes.

image  image

It took some pretty strong pushing, but sure enough, the tube cleared up with a little Coke. I’m not sure if that’s a commercial for it or not.  But nonetheless, we now know a quick fix at home.  And sweet Landon had an unexpected first.  His first Coke.

Landon Coke

A Super First Birthday

02 Thursday Oct 2014

Posted by Mama Laughs in Lissencephaly

≈ 6 Comments

Tags

birthday, lissencephaly, superhero, twins

We celebrated the boys’ first birthday on September 20th with some very special family and friends.

 

We enjoyed cupcakes and ice cream, while the twins LOVED some cool whip!

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We helped them get a taste, and then they dove right in!  In fact, they got seconds, and thirds!

 

We opened presents.  The boys received clothes, toys, diapers, therapy items, and money to purchase more therapy items; all of which we were very thankful for.   The birthday boys were very lucky to have so many great helpers!

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My presents.

My presents.

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The costume gives him super strength.

The costume gives him super strength.

<3

❤

 

Happy birthday Landon!  I give you a kiss!

Happy birthday Landon! I give you a kiss!

 

We wanted to include the boys in an activity they enjoy (getting rides in their chairs) and let the kids show off their superhero costumes.  So what better way than a superhero parade!

 

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And wouldn’t you know it, every good superhero parade turns in to a photo shoot!

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And we had to include Landon and Nolan’s favorite activities; snuggling and smiling!

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And no party is complete without a cramped, awkward photo with around 30 people on a set of stairs.  (I’m really pulling for this to become a tradition every time we have a get together…you’ve been warned.)

DSC_0006

 

It was a celebration befitting of heroes.  Thanks to your participation in the hero challenge, we were also able to display a running slide show of some of the awesome, thoughtful, kind things that have been done this year in Landon and Nolan’s honor.  It was wonderful to see, and wonderful to share.  So THANK YOU for making that possible.  In fact, the ripple effects of that are still rolling in.  I’ll share some of the specifics of that soon.

We were surrounded by many of the very people who have helped us find strength this year.  They’ve traveled hours numerous times to visit, help, cry, and laugh.  They’ve gone through the shock of the diagnosis with us, held our hands, dried our tears, kept our then 2 year old when we had to focus on the newborns and the unknown.  They’ve paced the NICU, rocked our babies, washed our bottles, washed our clothes, and cooked our meals.

We were surrounded in spirit by many more.  Some sent cards and gifts, some from the heart, and others from the pits 🙂 and many more sent encouragement and well wishes.  They’ve shared our burden, lightened our load, and held us up in so many ways.  And one year later, the support crew only grows.  Never faltering.  So we celebrated a super first birthday, and we thank you for a super first year.

 

 

 

 

 

 

 

 

 

 

 

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